Function to search and download gbif data

Source: R/search_gbif_data.R

Searchs gbif data using the function occ from the spocc package

searh_gbif_data(
  genus,
  species,
  occlim = 10000,
  writeFile = FALSE,
  leafletplot = FALSE,
  showClusters = FALSE
)

Arguments

genus

Species genus
species

Species name
occlim

Occurrence data search limit.
writeFile

Write gibif data into a csv
leafletplot

Logical, if TRUE the records will be plotted on a leaflet map.
showClusters

Logical. Display geographic cluster on the leaflet map.

Value

Returns a data.frame with coordinate data from species

Examples

if (FALSE) {
# Species genus
genus <- "ambystoma"
# Species name
species <- "tigrinum"
# GBIF search
ambystoma_tigrinum <- searh_gbif_data(genus,species,
                                      occlim=100,
                                      writeFile=FALSE)
head(ambystoma_tigrinum[,1:5])
}